Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine-acyl-acp acyltransferase | RT97_08240 | Not Available | Positive | 1793199 - 1794086 | 32357.1 |
| polyphosphate kinase | RT97_08245 | Not Available | Positive | 1794083 - 1796404 | 85987.0 |
| phosphohistidine phosphatase | RT97_08250 | Not Available | Positive | 1796424 - 1796885 | 17097.6 |
| exopolyphosphatase | RT97_08255 | Not Available | Negative | 1797035 - 1798549 | 54857.6 |
| phosphate abc transporter substrate-binding protein | RT97_08260 | Not Available | Positive | 1798806 - 1799840 | 36303.2 |
| phosphate transporter permease subunit pstc | RT97_08265 | Not Available | Positive | 1799874 - 1800953 | 37588.9 |
| phosphate transport system permease psta | RT97_08270 | Not Available | Positive | 1800950 - 1801834 | 31697.6 |
| phosphate abc transporter atp-binding protein | RT97_08275 | Not Available | Positive | 1801853 - 1802632 | 29011.0 |
| transcriptional regulator phou | RT97_08280 | Not Available | Positive | 1802642 - 1803343 | 25848.1 |
| chemotaxis protein chey | RT97_08285 | Not Available | Positive | 1803371 - 1804063 | 25790.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
