Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | RT97_08135 | Not Available | Negative | 1769361 - 1770410 | 37990.6 |
| glutathione s-transferase | RT97_08140 | Not Available | Negative | 1770626 - 1771261 | 23986.0 |
| carboxymethylenebutenolidase | RT97_08145 | Not Available | Negative | 1771389 - 1772090 | 24668.3 |
| hypothetical protein | RT97_08150 | Not Available | Negative | 1772114 - 1772977 | 31610.8 |
| chloroperoxidase | RT97_08155 | Not Available | Negative | 1773014 - 1773985 | 34917.4 |
| lysr family transcriptional regulator | RT97_08160 | Not Available | Negative | 1774107 - 1775150 | 37775.4 |
| transcriptional regulator | RT97_08165 | Not Available | Negative | 1775301 - 1778183 | 104177.0 |
| hypothetical protein | RT97_08170 | Not Available | Positive | 1778878 - 1779519 | 22277.0 |
| alpha/beta hydrolase | RT97_08180 | Not Available | Positive | 1780166 - 1780987 | 27869.6 |
| hypothetical protein | RT97_08185 | Not Available | Positive | 1781025 - 1781273 | 8358.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
