Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | RT97_08085 | Not Available | Negative | 1759472 - 1760662 | 40359.6 |
| alkylhydroperoxidase | RT97_08090 | Not Available | Negative | 1760796 - 1761272 | 17810.2 |
| lipid a 3-o-deacylase | RT97_08095 | Not Available | Negative | 1761387 - 1761986 | 21835.7 |
| alcohol dehydrogenase | RT97_08100 | Not Available | Negative | 1762109 - 1763227 | 40025.4 |
| lysr family transcriptional regulator | RT97_08105 | Not Available | Negative | 1763362 - 1764285 | 33983.2 |
| nad(p)h dehydrogenase | RT97_08110 | Not Available | Negative | 1764398 - 1765027 | 22208.4 |
| glyoxalase | RT97_08115 | Not Available | Negative | 1765087 - 1766037 | 35305.9 |
| nitroreductase | RT97_08120 | Not Available | Negative | 1766069 - 1766749 | 25652.8 |
| tryptophan 2,3-dioxygenase | RT97_08125 | Not Available | Negative | 1766918 - 1767820 | 33973.6 |
| amidase | RT97_08130 | Not Available | Negative | 1767848 - 1769236 | 48535.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
