Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_08030 | Not Available | Positive | 1752678 - 1753068 | 14107.5 |
| peroxiredoxin | RT97_08035 | Not Available | Negative | 1753215 - 1753766 | 19145.6 |
| nmra family transcriptional regulator | RT97_08045 | Not Available | Negative | 1754469 - 1755224 | 26458.5 |
| alkylhydroperoxidase | RT97_08050 | Not Available | Negative | 1755286 - 1755765 | 18259.1 |
| hypothetical protein | RT97_08055 | Not Available | Positive | 1756052 - 1756348 | 10147.0 |
| zinc finger ubp-type protein | RT97_08060 | Not Available | Negative | 1756469 - 1756726 | 9374.12 |
| glutathione s-transferase | RT97_08065 | Not Available | Negative | 1756800 - 1757699 | 33436.9 |
| cupin | RT97_08070 | Not Available | Negative | 1757914 - 1758333 | 14765.2 |
| osmotically inducible protein c | RT97_08075 | Not Available | Negative | 1758446 - 1758832 | 14020.0 |
| hypothetical protein | RT97_08080 | Not Available | Negative | 1758864 - 1759130 | 9987.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
