Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | RT97_00700 | Not Available | Positive | 137712 - 138425 | 24148.6 |
| plasmid stabilization protein | RT97_00705 | Not Available | Positive | 138562 - 138873 | 10815.5 |
| nmra family transcriptional regulator | RT97_00710 | Not Available | Positive | 138883 - 139746 | 30473.2 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | RT97_00715 | Not Available | Positive | 140052 - 141446 | 50341.2 |
| 8-amino-7-oxononanoate synthase | RT97_00720 | Not Available | Positive | 141430 - 142662 | 42958.9 |
| dethiobiotin synthetase | RT97_00725 | Not Available | Positive | 142659 - 143387 | 25385.1 |
| aldo/keto reductase | RT97_00730 | Not Available | Negative | 143397 - 144431 | 37735.2 |
| arac family transcriptional regulator | RT97_00735 | Not Available | Positive | 144676 - 145668 | 36263.0 |
| cation transporter | RT97_00740 | Not Available | Positive | 145682 - 146623 | 32808.0 |
| cyclopropane-fatty-acyl-phospholipid synthase | RT97_00745 | Not Available | Positive | 146747 - 147979 | 45980.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
