Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RT97_07980 | Not Available | Negative | 1743781 - 1744782 | 35855.2 |
| uracil phosphoribosyltransferase | RT97_07985 | Not Available | Negative | 1744948 - 1745577 | 23105.5 |
| uracil phosphoribosyltransferase | RT97_07990 | Not Available | Negative | 1745618 - 1747027 | 50554.7 |
| hypothetical protein | RT97_07995 | Not Available | Negative | 1747024 - 1748364 | 47955.1 |
| hypothetical protein | RT97_08000 | Not Available | Negative | 1748459 - 1748926 | 17246.8 |
| membrane protein | RT97_08005 | Not Available | Negative | 1748953 - 1749372 | 14864.8 |
| rna polymerase sigma factor | RT97_08010 | Not Available | Positive | 1749485 - 1750075 | 21750.0 |
| hypothetical protein | RT97_08015 | Not Available | Positive | 1750072 - 1750713 | 22672.8 |
| atp-binding protein | RT97_08020 | Not Available | Negative | 1750744 - 1752261 | 53721.3 |
| acyl carrier protein | RT97_08025 | Not Available | Positive | 1752363 - 1752674 | 11213.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
