Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoglycerate dehydrogenase | RT97_07820 | Not Available | Negative | 1712508 - 1713515 | 36632.3 |
| hypothetical protein | RT97_07825 | Not Available | Negative | 1713617 - 1713982 | 12949.8 |
| lexa family transcriptional regulator | RT97_07830 | Not Available | Negative | 1714121 - 1714804 | 24859.3 |
| asparaginase | RT97_07835 | Not Available | Positive | 1714878 - 1715840 | 32931.8 |
| adenylate kinase | RT97_07840 | Not Available | Negative | 1715867 - 1716523 | 23421.1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | RT97_07845 | Not Available | Negative | 1716648 - 1717421 | 26992.2 |
| tetraacyldisaccharide 4'-kinase | RT97_07850 | Not Available | Negative | 1717430 - 1717612 | 6723.17 |
| tetraacyldisaccharide 4'-kinase | RT97_07855 | Not Available | Negative | 1717593 - 1718624 | 37255.9 |
| biopolymer transporter exbd | RT97_07860 | Not Available | Negative | 1718625 - 1719050 | 15046.1 |
| flagellar motor protein mota | RT97_07865 | Not Available | Negative | 1719151 - 1719783 | 22516.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
