Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsh | RT97_07770 | Not Available | Positive | 1700925 - 1702841 | 69997.4 |
| dihydropteroate synthase | RT97_07775 | Not Available | Positive | 1702936 - 1703772 | 29732.9 |
| phosphoglucosamine mutase | RT97_07780 | Not Available | Positive | 1703769 - 1705106 | 47349.8 |
| gnat family acetyltransferase | RT97_07785 | Not Available | Positive | 1705103 - 1705585 | 16882.2 |
| acyl-coa dehydrogenase | RT97_07790 | Not Available | Negative | 1705668 - 1706939 | 46304.5 |
| aminoglycoside phosphotransferase | RT97_07795 | Not Available | Negative | 1706977 - 1708083 | 40997.8 |
| crp/fnr family transcriptional regulator | RT97_07800 | Not Available | Negative | 1708085 - 1708804 | 26764.3 |
| enoyl-coa hydratase | RT97_07805 | Not Available | Negative | 1708866 - 1709645 | 27245.4 |
| 3-hydroxyacyl-coa dehydrogenase | RT97_07810 | Not Available | Negative | 1709679 - 1711199 | 54484.7 |
| transporter | RT97_07815 | Not Available | Negative | 1711346 - 1712503 | 39731.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
