Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_07570 | Not Available | Positive | 1661072 - 1661773 | 24569.4 |
| 3-hydroxybutyrate dehydrogenase | RT97_07575 | Not Available | Negative | 1661863 - 1662633 | 27029.3 |
| alpha/beta hydrolase | RT97_07580 | Not Available | Positive | 1662660 - 1663655 | 35687.6 |
| gtp pyrophosphokinase | RT97_07585 | Not Available | Positive | 1663668 - 1665908 | 81902.0 |
| Trna-val | Not Available | Not Available | Positive | 1665957 - 1666033 | Not Available |
| hypothetical protein | RT97_07595 | Not Available | Positive | 1666247 - 1666573 | 11979.2 |
| polyhydroxyalkanoate synthesis repressor phar | RT97_07600 | Not Available | Positive | 1666644 - 1667204 | 21074.7 |
| ribosomal protein s12 methylthiotransferase | RT97_07605 | Not Available | Positive | 1667283 - 1668689 | 50889.4 |
| Trna-leu | Not Available | Not Available | Positive | 1668768 - 1668852 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1669017 - 1669101 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
