Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin | RT97_07520 | Not Available | Positive | 1646018 - 1652056 | 217167.0 |
| hypothetical protein | RT97_07525 | Not Available | Positive | 1652152 - 1652796 | 23426.4 |
| hypothetical protein | RT97_07530 | Not Available | Positive | 1652843 - 1653349 | 18814.0 |
| extradiol dioxygenase | RT97_07535 | Not Available | Positive | 1653346 - 1653750 | 14915.6 |
| transcription-repair coupling factor | RT97_07540 | Not Available | Negative | 1653904 - 1656938 | 112572.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | RT97_07545 | Not Available | Positive | 1657007 - 1657771 | 26881.4 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | RT97_07550 | Not Available | Positive | 1657768 - 1658259 | 17111.7 |
| histidine kinase | RT97_07555 | Not Available | Negative | 1658278 - 1659687 | 51815.5 |
| chemotaxis protein chey | RT97_07560 | Not Available | Negative | 1659762 - 1660493 | 27176.9 |
| hypothetical protein | RT97_07565 | Not Available | Positive | 1660666 - 1661022 | 12901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
