Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | RT97_00650 | Not Available | Negative | 125599 - 126828 | 45466.1 |
| chemotaxis protein cheb | RT97_00655 | Not Available | Negative | 126818 - 127432 | 21696.4 |
| chemotaxis protein cher | RT97_00660 | Not Available | Negative | 127429 - 128253 | 31140.2 |
| chemotaxis protein chey | RT97_00665 | Not Available | Negative | 128286 - 131783 | 128939.0 |
| atp-dependent dna helicase | RT97_00670 | Not Available | Positive | 131928 - 134246 | 85111.1 |
| 2og-fe(ii) oxygenase | RT97_00675 | Not Available | Positive | 134233 - 134865 | 23677.3 |
| hypothetical protein | RT97_00680 | Not Available | Negative | 134881 - 135093 | 7864.69 |
| acyl-coa dehydrogenase | RT97_00685 | Not Available | Positive | 135351 - 136361 | 35576.3 |
| acetylglucosaminylphosphatidylinositol deacetylase | RT97_00690 | Not Available | Positive | 136349 - 137107 | 27263.8 |
| methyltransferase | RT97_00695 | Not Available | Positive | 137104 - 137715 | 23188.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
