Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | RT97_07420 | Not Available | Positive | 1622813 - 1623298 | 17617.5 |
| permease | RT97_07425 | Not Available | Negative | 1623305 - 1624600 | 45988.8 |
| lyttr family transcriptional regulator | RT97_07430 | Not Available | Negative | 1624597 - 1625349 | 27896.4 |
| histidine kinase | RT97_07435 | Not Available | Negative | 1625346 - 1626422 | 38700.4 |
| argininosuccinate lyase | RT97_07440 | Not Available | Positive | 1626481 - 1627878 | 51553.1 |
| protease | RT97_07445 | Not Available | Positive | 1627916 - 1629394 | 55364.0 |
| hemolysin d | RT97_07450 | Not Available | Positive | 1629569 - 1630822 | 43338.9 |
| multidrug transporter | RT97_07455 | Not Available | Positive | 1630832 - 1634011 | 112847.0 |
| transporter | RT97_07460 | Not Available | Positive | 1634041 - 1635459 | 49706.4 |
| gntr family transcriptional regulator | RT97_07465 | Not Available | Positive | 1635645 - 1636337 | 25762.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
