Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation tolerance protein cuta | RT97_07355 | Not Available | Positive | 1603833 - 1612028 | 299717.0 |
| hypothetical protein | RT97_07360 | Not Available | Positive | 1612058 - 1612585 | 19211.8 |
| transporter | RT97_07365 | Not Available | Positive | 1612845 - 1614029 | 39962.4 |
| hypothetical protein | RT97_07370 | Not Available | Negative | 1614061 - 1614312 | 9191.18 |
| hypothetical protein | RT97_07375 | Not Available | Negative | 1614330 - 1614575 | 8774.17 |
| hypothetical protein | RT97_07395 | Not Available | Positive | 1619053 - 1620012 | 30376.0 |
| hypothetical protein | RT97_07400 | Not Available | Positive | 1620163 - 1620813 | 23695.7 |
| lysr family transcriptional regulator | RT97_07405 | Not Available | Negative | 1620810 - 1621730 | 32924.4 |
| gcn5 family acetyltransferase | RT97_07410 | Not Available | Positive | 1621780 - 1622304 | 19180.0 |
| tautomerase | RT97_07415 | Not Available | Negative | 1622323 - 1622715 | 14692.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
