Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | RT97_07255 | Not Available | Negative | 1581604 - 1582347 | 25751.1 |
| acp s-malonyltransferase | RT97_07260 | Not Available | Negative | 1582375 - 1583328 | 32333.0 |
| 3-oxoacyl-acp synthase | RT97_07265 | Not Available | Negative | 1583379 - 1584356 | 34097.1 |
| phosphate acyltransferase | RT97_07270 | Not Available | Negative | 1584356 - 1585387 | 35926.3 |
| 50s ribosomal protein l32 | RT97_07275 | Not Available | Negative | 1585515 - 1585697 | 6685.04 |
| hypothetical protein | RT97_07280 | Not Available | Negative | 1585853 - 1586410 | 20157.6 |
| septum formation inhibitor maf | RT97_07285 | Not Available | Positive | 1586494 - 1587075 | 20833.2 |
| uroporphyrin-iii methyltransferase | RT97_07290 | Not Available | Positive | 1587072 - 1587833 | 26889.5 |
| mfs transporter | RT97_07295 | Not Available | Positive | 1587836 - 1588987 | 38587.7 |
| peptidase s49 | RT97_07300 | Not Available | Negative | 1589000 - 1590043 | 37759.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
