Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_07205 | Not Available | Negative | 1571676 - 1572044 | 13418.4 |
| signal peptidase | RT97_07210 | Not Available | Negative | 1572076 - 1573041 | 35877.5 |
| elongation factor 4 | RT97_07215 | Not Available | Negative | 1573049 - 1574860 | 66317.4 |
| serine peptidase | RT97_07220 | Not Available | Negative | 1575383 - 1576867 | 52180.5 |
| sigma-e factor negative regulatory protein | RT97_07225 | Not Available | Negative | 1576967 - 1578037 | 39370.7 |
| anti-sigma factor | RT97_07230 | Not Available | Negative | 1578061 - 1578726 | 23060.3 |
| rna polymerase sigma factor rpoe | RT97_07235 | Not Available | Negative | 1578744 - 1579379 | 23923.4 |
| hypothetical protein | RT97_07240 | Not Available | Negative | 1579428 - 1579910 | 17310.7 |
| 3-oxoacyl-acp synthase | RT97_07245 | Not Available | Negative | 1579924 - 1581168 | 43454.6 |
| acyl carrier protein | RT97_07250 | Not Available | Negative | 1581265 - 1581504 | 8643.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
