Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-shock protein | RT97_07155 | Not Available | Positive | 1561868 - 1563139 | 45919.7 |
| metal-dependent hydrolase | RT97_07160 | Not Available | Positive | 1563136 - 1563663 | 20096.4 |
| family 2 glycosyl transferase | RT97_07165 | Not Available | Positive | 1563660 - 1565558 | 71212.7 |
| galactosyl transferase gma12/mnn10 family protein | RT97_07170 | Not Available | Negative | 1565577 - 1566923 | 50663.6 |
| beta-hexosaminidase | RT97_07175 | Not Available | Negative | 1566950 - 1568041 | 39121.0 |
| acp synthase | RT97_07180 | Not Available | Negative | 1568038 - 1568448 | 15341.4 |
| pyridoxamine 5'-phosphate oxidase | RT97_07185 | Not Available | Negative | 1568445 - 1569227 | 27905.9 |
| dna recombination protein reco | RT97_07190 | Not Available | Negative | 1569224 - 1569997 | 27955.6 |
| gtpase era | RT97_07195 | Not Available | Negative | 1569999 - 1570964 | 35574.9 |
| ribonuclease iii | RT97_07200 | Not Available | Negative | 1570972 - 1571658 | 24802.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
