Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_07105 | Not Available | Positive | 1550364 - 1553156 | 93952.4 |
| trna pseudouridine synthase a | RT97_07110 | Not Available | Positive | 1553184 - 1554005 | 30400.1 |
| n-(5'-phosphoribosyl)anthranilate isomerase | RT97_07115 | Not Available | Positive | 1554002 - 1554700 | 24290.9 |
| tryptophan synthase subunit alpha | RT97_07120 | Not Available | Positive | 1554747 - 1556024 | 45665.2 |
| tryptophan synthase alpha chain | RT97_07125 | Not Available | Positive | 1556024 - 1556869 | 29490.8 |
| acetyl-coa carboxylase subunit beta | RT97_07130 | Not Available | Positive | 1556934 - 1557806 | 31671.4 |
| hypothetical protein | RT97_07135 | Not Available | Negative | 1557889 - 1558449 | 20562.6 |
| peptidase s16 | RT97_07140 | Not Available | Positive | 1558475 - 1559164 | 25454.0 |
| hypothetical protein | RT97_07145 | Not Available | Positive | 1559257 - 1560114 | 31845.3 |
| lysyl-trna synthetase | RT97_07150 | Not Available | Positive | 1560303 - 1561865 | 58405.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
