Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacid dehydrogenase | RT97_06870 | Not Available | Negative | 1497684 - 1499105 | 50041.0 |
| hypothetical protein | RT97_06880 | Not Available | Negative | 1500320 - 1500736 | 14361.1 |
| aldo/keto reductase | RT97_06885 | Not Available | Positive | 1500863 - 1501720 | 30792.1 |
| permease | RT97_06890 | Not Available | Negative | 1501728 - 1503224 | 51830.4 |
| gntr family transcriptional regulator | RT97_06895 | Not Available | Negative | 1503395 - 1504153 | 27760.4 |
| asp/glu/hydantoin racemase | RT97_06900 | Not Available | Negative | 1504203 - 1504940 | 25984.7 |
| nitrate reductase | RT97_06905 | Not Available | Negative | 1504969 - 1506462 | 53862.2 |
| hypothetical protein | RT97_06915 | Not Available | Positive | 1509785 - 1510090 | 11086.3 |
| s-layer protein | RT97_06920 | Not Available | Negative | 1510167 - 1511876 | 60834.1 |
| hypothetical protein | RT97_06925 | Not Available | Positive | 1512096 - 1512458 | 13408.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
