Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carotenoid oxygenase | RT97_06820 | Not Available | Negative | 1485967 - 1487466 | 54491.2 |
| hypothetical protein | RT97_06825 | Not Available | Negative | 1487474 - 1487908 | 14710.7 |
| membrane protein | RT97_06830 | Not Available | Negative | 1488049 - 1489182 | 40629.6 |
| gntr family transcriptional regulator | RT97_06835 | Not Available | Negative | 1489348 - 1490055 | 25560.6 |
| c4-dicarboxylate abc transporter | RT97_06840 | Not Available | Negative | 1490064 - 1491404 | 46653.6 |
| iclr family transcriptional regulator | RT97_06845 | Not Available | Positive | 1491739 - 1492578 | 30679.5 |
| abc transporter permease | RT97_06850 | Not Available | Negative | 1492684 - 1493586 | 32463.5 |
| abc transporter permease | RT97_06855 | Not Available | Negative | 1493623 - 1495368 | 62861.0 |
| spermidine/putrescine abc transporter atp-binding protein | RT97_06860 | Not Available | Negative | 1495406 - 1496491 | 39307.6 |
| dehydrogenase | RT97_06865 | Not Available | Negative | 1496536 - 1497615 | 39498.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
