Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hxlr family transcriptional regulator | RT97_06715 | Not Available | Negative | 1464452 - 1464799 | 13011.8 |
| 3-hydroxyisobutyrate dehydrogenase | RT97_06720 | Not Available | Positive | 1464915 - 1465784 | 30579.0 |
| transcriptional regulator | RT97_06725 | Not Available | Positive | 1465922 - 1466605 | 25313.8 |
| histidine kinase | RT97_06730 | Not Available | Positive | 1466605 - 1468029 | 52493.8 |
| aspartyl beta-hydroxylase | RT97_06735 | Not Available | Positive | 1468133 - 1469029 | 34524.5 |
| lysr family transcriptional regulator | RT97_06740 | Not Available | Negative | 1469030 - 1469944 | 32974.5 |
| hypothetical protein | RT97_06745 | Not Available | Positive | 1470032 - 1470460 | 14575.7 |
| transcriptional regulator | RT97_06755 | Not Available | Positive | 1471306 - 1471986 | 24547.6 |
| histidine kinase | RT97_06760 | Not Available | Positive | 1471991 - 1473340 | 48525.0 |
| oxidoreductase | RT97_06765 | Not Available | Positive | 1473354 - 1473575 | 7895.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
