Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_06660 | Not Available | Negative | 1450930 - 1451520 | 21385.4 |
| lysr family transcriptional regulator | RT97_06665 | Not Available | Positive | 1451627 - 1452505 | 32081.0 |
| hypothetical protein | RT97_06675 | Not Available | Positive | 1455117 - 1457543 | 88956.5 |
| urease accessory protein ured | RT97_06680 | Not Available | Negative | 1458069 - 1458899 | 30372.4 |
| cmp deaminase | RT97_06685 | Not Available | Negative | 1459022 - 1459552 | 19082.3 |
| abc transporter permease | RT97_06690 | Not Available | Negative | 1459549 - 1460583 | 37366.7 |
| rieske (2fe-2s) protein | RT97_06695 | Not Available | Positive | 1460933 - 1462060 | 42486.3 |
| amino acid dehydrogenase | RT97_06700 | Not Available | Negative | 1462091 - 1463392 | 46597.9 |
| asnc family transcriptional regulator | RT97_06705 | Not Available | Positive | 1463521 - 1463988 | 17462.4 |
| osmc family protein | RT97_06710 | Not Available | Positive | 1464054 - 1464455 | 14547.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
