Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_06605 | Not Available | Negative | 1439893 - 1440453 | 20477.6 |
| hydrolase nlp/p60 | RT97_06615 | Not Available | Positive | 1441024 - 1441545 | 18575.4 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | RT97_06620 | Not Available | Negative | 1441562 - 1442407 | 30388.0 |
| carbon starvation protein a | RT97_06625 | Not Available | Positive | 1442593 - 1444665 | 73475.3 |
| hypothetical protein | RT97_06630 | Not Available | Positive | 1444674 - 1444880 | 7726.38 |
| glutamate carboxypeptidase | RT97_06635 | Not Available | Positive | 1444994 - 1446265 | 44339.7 |
| hypothetical protein | RT97_06640 | Not Available | Positive | 1446386 - 1446805 | 15303.5 |
| cystathionine beta-lyase | RT97_06645 | Not Available | Negative | 1446952 - 1448160 | 43720.8 |
| abc transporter substrate-binding protein | RT97_06650 | Not Available | Negative | 1448202 - 1449212 | 34856.7 |
| sulfurtransferase | RT97_06655 | Not Available | Negative | 1449266 - 1450846 | 56139.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
