Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_06500 | Not Available | Negative | 1420914 - 1421579 | 24401.7 |
| hypothetical protein | RT97_06505 | Not Available | Negative | 1422548 - 1422760 | 7944.52 |
| sam-dependent methyltransferase | RT97_06510 | Not Available | Positive | 1423033 - 1423686 | 23507.0 |
| glyoxalase/bleomycin resistance protein/dioxygenase | RT97_06515 | Not Available | Negative | 1423719 - 1424144 | 15346.2 |
| transcriptional regulator | RT97_06520 | Not Available | Positive | 1424267 - 1424968 | 26086.8 |
| hypothetical protein | RT97_06525 | Not Available | Negative | 1424981 - 1425271 | 10492.5 |
| strictosidine synthase | RT97_06530 | Not Available | Positive | 1425375 - 1426478 | 39273.4 |
| beta-lactamase | RT97_06535 | Not Available | Negative | 1426579 - 1428147 | 56041.1 |
| hypothetical protein | RT97_06540 | Not Available | Positive | 1428450 - 1429097 | 24095.7 |
| map | RT97_06545 | Not Available | Negative | 1429103 - 1429897 | 28742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
