Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | RT97_06450 | Not Available | Positive | 1407578 - 1408795 | 42817.9 |
| acriflavine resistance protein b | RT97_06455 | Not Available | Positive | 1408792 - 1411968 | 113344.0 |
| transcriptional regulator | RT97_06460 | Not Available | Positive | 1411998 - 1412717 | 26587.4 |
| histidine kinase | RT97_06465 | Not Available | Positive | 1412756 - 1414099 | 48819.1 |
| sulfurtransferase | RT97_06470 | Not Available | Positive | 1414298 - 1415236 | 33118.3 |
| mfs transporter | RT97_06475 | Not Available | Positive | 1415404 - 1416642 | 42683.5 |
| hypothetical protein | RT97_06480 | Not Available | Positive | 1416665 - 1417651 | 35706.8 |
| histidine kinase | RT97_06485 | Not Available | Positive | 1417697 - 1419067 | 50458.4 |
| luxr family transcriptional regulator | RT97_06490 | Not Available | Positive | 1419124 - 1419765 | 23054.1 |
| hypothetical protein | RT97_06495 | Not Available | Positive | 1420206 - 1420451 | 8960.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
