Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_06395 | Not Available | Negative | 1394901 - 1395650 | 27392.2 |
| hypothetical protein | RT97_06400 | Not Available | Negative | 1396202 - 1396861 | 23691.0 |
| hypothetical protein | RT97_06405 | Not Available | Negative | 1396966 - 1397847 | 34297.9 |
| hypothetical protein | RT97_06410 | Not Available | Negative | 1398409 - 1398903 | 17997.7 |
| hypothetical protein | RT97_06415 | Not Available | Negative | 1399867 - 1400061 | 6737.0 |
| hypothetical protein | RT97_06425 | Not Available | Positive | 1402197 - 1403045 | 29579.4 |
| hypothetical protein | RT97_06430 | Not Available | Positive | 1403196 - 1403828 | 23085.3 |
| hydrolase | RT97_06435 | Not Available | Negative | 1403846 - 1404721 | 33590.1 |
| iclr family transcriptional regulator | RT97_06440 | Not Available | Negative | 1404877 - 1405659 | 27608.6 |
| rnd transporter | RT97_06445 | Not Available | Positive | 1406152 - 1407573 | 49197.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
