Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_06215 | Not Available | Positive | 1353653 - 1354390 | 27726.4 |
| antibiotic biosynthesis monooxygenase | RT97_06225 | Not Available | Positive | 1355372 - 1355674 | 10597.8 |
| flavodoxin | RT97_06230 | Not Available | Positive | 1356594 - 1357226 | 22124.3 |
| transposon tnsa | RT97_06240 | Not Available | Positive | 1363288 - 1364112 | 30155.1 |
| hypothetical protein | RT97_06245 | Not Available | Positive | 1364884 - 1365570 | 25750.3 |
| nmra family transcriptional regulator | RT97_06250 | Not Available | Positive | 1365629 - 1366489 | 30537.5 |
| hypothetical protein | RT97_06255 | Not Available | Positive | 1367159 - 1367341 | 6599.01 |
| tonb-dependent receptor | RT97_06260 | Not Available | Positive | 1367437 - 1369506 | 74905.9 |
| hypothetical protein | RT97_06270 | Not Available | Negative | 1370057 - 1371208 | 41795.5 |
| hypothetical protein | RT97_06275 | Not Available | Negative | 1371218 - 1372405 | 42745.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
