Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | RT97_06100 | Not Available | Negative | 1324176 - 1325498 | 48897.9 |
| hypothetical protein | RT97_06105 | Not Available | Positive | 1325698 - 1326375 | 24622.6 |
| dihydrodipicolinate synthetase | RT97_06110 | Not Available | Positive | 1326956 - 1327909 | 36024.8 |
| hypothetical protein | RT97_06115 | Not Available | Positive | 1328046 - 1328849 | 27735.3 |
| hypothetical protein | RT97_06120 | Not Available | Negative | 1328858 - 1329775 | 33298.4 |
| hypothetical protein | RT97_06130 | Not Available | Positive | 1330628 - 1331476 | 30466.9 |
| flavin reductase | RT97_06135 | Not Available | Positive | 1331596 - 1332165 | 20398.6 |
| ferredoxin | RT97_06140 | Not Available | Negative | 1332211 - 1333182 | 34986.8 |
| aldehyde dehydrogenase | RT97_06145 | Not Available | Negative | 1333399 - 1334862 | 52182.4 |
| hypothetical protein | RT97_06150 | Not Available | Positive | 1335027 - 1335980 | 35137.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
