Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | RT97_06040 | Not Available | Negative | 1310204 - 1310872 | 24752.7 |
| hypothetical protein | RT97_06045 | Not Available | Positive | 1312308 - 1312745 | 15631.2 |
| hypothetical protein | RT97_06050 | Not Available | Negative | 1313207 - 1313644 | 16359.8 |
| indolepyruvate ferredoxin oxidoreductase | RT97_06060 | Not Available | Negative | 1315198 - 1317384 | 78749.9 |
| cyclase | RT97_06065 | Not Available | Negative | 1317491 - 1318273 | 29084.1 |
| cyclase | RT97_06070 | Not Available | Negative | 1318311 - 1319102 | 28589.1 |
| short-chain dehydrogenase | RT97_06075 | Not Available | Negative | 1319102 - 1320373 | 45711.9 |
| acetyl-coa acetyltransferase | RT97_06080 | Not Available | Negative | 1320370 - 1321542 | 42152.5 |
| amp-binding protein | RT97_06085 | Not Available | Negative | 1321539 - 1323158 | 58749.0 |
| hypothetical protein | RT97_06095 | Not Available | Negative | 1323701 - 1324174 | 18189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
