Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_05970 | Not Available | Negative | 1296159 - 1296812 | 24089.3 |
| hypothetical protein | RT97_05975 | Not Available | Positive | 1297207 - 1298229 | 36235.7 |
| hypothetical protein | RT97_05980 | Not Available | Positive | 1298233 - 1298859 | 22546.8 |
| methyltransferase type 11 | RT97_05985 | Not Available | Negative | 1299491 - 1301179 | 61680.1 |
| hypothetical protein | RT97_05990 | Not Available | Negative | 1301189 - 1301470 | 10166.7 |
| exodeoxyribonuclease vii large subunit | RT97_05995 | Not Available | Negative | 1301467 - 1303212 | 63126.1 |
| hypothetical protein | RT97_06000 | Not Available | Negative | 1303490 - 1303942 | 16656.2 |
| hypothetical protein | RT97_06010 | Not Available | Positive | 1305200 - 1306642 | 53635.2 |
| hypothetical protein | RT97_06015 | Not Available | Positive | 1306639 - 1307460 | 31302.2 |
| hypothetical protein | RT97_06035 | Not Available | Positive | 1309656 - 1309874 | 8194.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
