Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_05885 | Not Available | Positive | 1272978 - 1273874 | 32747.5 |
| relaxase | RT97_05890 | Not Available | Negative | 1274005 - 1275093 | 40755.9 |
| hypothetical protein | RT97_05895 | Not Available | Negative | 1275101 - 1275655 | 20154.4 |
| transcriptional regulator | RT97_05910 | Not Available | Negative | 1278565 - 1279140 | 20524.6 |
| pyridine nucleotide-disulfide oxidoreductase | RT97_05915 | Not Available | Positive | 1279299 - 1280192 | 31895.1 |
| protein-s-isoprenylcysteine methyltransferase | RT97_05920 | Not Available | Positive | 1280298 - 1280759 | 16879.4 |
| alkylhydroperoxidase | RT97_05930 | Not Available | Negative | 1285333 - 1285782 | 16302.7 |
| hypothetical protein | RT97_05950 | Not Available | Positive | 1292212 - 1292577 | 13039.6 |
| xre family transcriptional regulator | RT97_05955 | Not Available | Negative | 1292662 - 1293234 | 20398.6 |
| hypothetical protein | RT97_05965 | Not Available | Negative | 1294979 - 1295929 | 34002.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
