Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase p | RT97_05825 | Not Available | Positive | 1258621 - 1259766 | 41847.1 |
| trag family protein | RT97_05830 | Not Available | Positive | 1259732 - 1261687 | 72225.8 |
| hypothetical protein | RT97_05835 | Not Available | Positive | 1261754 - 1262947 | 44426.7 |
| conjugal transfer protein trax | RT97_05840 | Not Available | Positive | 1263176 - 1263838 | 24432.8 |
| hypothetical protein | RT97_05845 | Not Available | Negative | 1263919 - 1265046 | 42436.9 |
| oxidoreductase with molybdenum-binding domain protein | RT97_05855 | Not Available | Negative | 1265846 - 1268236 | 83905.4 |
| fad-binding molybdopterin dehydrogenase | RT97_05860 | Not Available | Negative | 1268233 - 1269234 | 35046.5 |
| (2fe-2s)-binding protein | RT97_05865 | Not Available | Negative | 1269231 - 1269722 | 17529.1 |
| oxidoreductase | RT97_05870 | Not Available | Negative | 1269724 - 1270575 | 29661.8 |
| aldehyde oxidase | RT97_05875 | Not Available | Negative | 1270620 - 1271603 | 35524.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
