Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid ac-diamide synthase | RT97_05775 | Not Available | Negative | 1248698 - 1249486 | 28511.7 |
| hypothetical protein | RT97_05780 | Not Available | Positive | 1249698 - 1250177 | 17386.7 |
| transposase | RT97_05785 | Not Available | Positive | 1250369 - 1250692 | 11242.1 |
| type iv secretory pathway virb3 family protein | RT97_05790 | Not Available | Positive | 1250705 - 1251070 | 13688.1 |
| conjugal transfer protein | RT97_05795 | Not Available | Positive | 1251085 - 1253592 | 93860.0 |
| type iv secretion system family protein | RT97_05800 | Not Available | Positive | 1253585 - 1254319 | 26991.4 |
| conjugal transfer protein trbl | RT97_05805 | Not Available | Positive | 1254559 - 1255611 | 37505.2 |
| hypothetical protein | RT97_05810 | Not Available | Positive | 1255763 - 1256485 | 26886.8 |
| conjugal transfer protein trbg | RT97_05815 | Not Available | Positive | 1256482 - 1257324 | 30702.1 |
| conjugal transfer protein trbi | RT97_05820 | Not Available | Positive | 1257321 - 1258652 | 46355.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
