Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_05655 | Not Available | Negative | 1225976 - 1226731 | 28132.8 |
| peptidase s15 | RT97_05660 | Not Available | Negative | 1226767 - 1228503 | 64023.4 |
| gdp-mannose dehydrogenase | RT97_05670 | Not Available | Negative | 1229656 - 1230519 | 30584.0 |
| hypothetical protein | RT97_05675 | Not Available | Negative | 1230519 - 1231481 | 33885.1 |
| hypothetical protein | RT97_05680 | Not Available | Negative | 1231505 - 1232653 | 41951.9 |
| hypothetical protein | RT97_05685 | Not Available | Negative | 1232663 - 1234336 | 59124.6 |
| maleylacetate reductase | RT97_05690 | Not Available | Negative | 1234342 - 1235391 | 36267.0 |
| stress responsive protein | RT97_05695 | Not Available | Negative | 1235482 - 1235796 | 11670.9 |
| hypothetical protein | RT97_05700 | Not Available | Negative | 1235801 - 1236103 | 11160.4 |
| laci family transcriptional regulator | RT97_05705 | Not Available | Negative | 1236128 - 1237102 | 34516.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
