Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | RT97_05595 | Not Available | Negative | 1211328 - 1212527 | 42569.1 |
| 3-oxoacyl-acp reductase | RT97_05600 | Not Available | Negative | 1212601 - 1213359 | 26038.7 |
| iclr family transcriptional regulator | RT97_05610 | Not Available | Positive | 1215312 - 1216106 | 28094.8 |
| dna-binding protein | RT97_05615 | Not Available | Negative | 1216439 - 1217836 | 49930.2 |
| integrase | RT97_05620 | Not Available | Positive | 1218168 - 1219202 | 38268.7 |
| hypothetical protein | RT97_05630 | Not Available | Positive | 1221924 - 1222748 | 28641.1 |
| hypothetical protein | RT97_05635 | Not Available | Positive | 1223085 - 1223453 | 13330.7 |
| hypothetical protein | RT97_05640 | Not Available | Positive | 1223604 - 1223990 | 14067.5 |
| hypothetical protein | RT97_05645 | Not Available | Positive | 1224274 - 1224822 | 20423.7 |
| hypothetical protein | RT97_05650 | Not Available | Positive | 1225345 - 1226004 | 24323.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
