Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | RT97_05460 | Not Available | Positive | 1178808 - 1179437 | 22751.7 |
| hypothetical protein | RT97_05475 | Not Available | Negative | 1187953 - 1188243 | 10562.8 |
| hypothetical protein | RT97_05480 | Not Available | Negative | 1188684 - 1188872 | 6480.44 |
| tetr family transcriptional regulator | RT97_05485 | Not Available | Positive | 1189084 - 1189785 | 25881.0 |
| abc transporter substrate-binding protein | RT97_05490 | Not Available | Positive | 1189901 - 1190875 | 34476.9 |
| thiolase | RT97_05500 | Not Available | Positive | 1191237 - 1192391 | 39789.3 |
| crotonase | RT97_05505 | Not Available | Positive | 1192412 - 1193203 | 28426.7 |
| short-chain dehydrogenase | RT97_05510 | Not Available | Positive | 1193268 - 1194080 | 28124.0 |
| long-chain fatty acid--coa ligase | RT97_05520 | Not Available | Positive | 1195135 - 1196628 | 54097.7 |
| betaine-aldehyde dehydrogenase | RT97_05530 | Not Available | Positive | 1197887 - 1199365 | 53275.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
