Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba oxidoreductase | RT97_05380 | Not Available | Positive | 1162630 - 1163277 | 23874.2 |
| lysr family transcriptional regulator | RT97_05400 | Not Available | Negative | 1167633 - 1168580 | 34559.5 |
| alkylhydroperoxidase | RT97_05415 | Not Available | Positive | 1170959 - 1171438 | 18180.0 |
| nmra family transcriptional regulator | RT97_05420 | Not Available | Positive | 1171474 - 1172229 | 26607.7 |
| hypothetical protein | RT97_05425 | Not Available | Positive | 1172377 - 1172904 | 18742.1 |
| peroxiredoxin | RT97_05435 | Not Available | Positive | 1174498 - 1174992 | 17216.5 |
| hypothetical protein | RT97_05440 | Not Available | Negative | 1175001 - 1175969 | 34027.4 |
| oxidoreductase | RT97_05445 | Not Available | Negative | 1175996 - 1176976 | 34327.5 |
| lysr family transcriptional regulator | RT97_05450 | Not Available | Negative | 1177021 - 1178007 | 35607.7 |
| chemotaxis protein chey | RT97_05455 | Not Available | Positive | 1178383 - 1178757 | 13631.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
