Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_05315 | Not Available | Positive | 1151451 - 1151717 | 9918.71 |
| nad(p)h:quinone oxidoreductase | RT97_05320 | Not Available | Positive | 1151763 - 1152365 | 21008.1 |
| osmotically inducible protein c | RT97_05325 | Not Available | Positive | 1152401 - 1153594 | 42393.7 |
| hypothetical protein | RT97_05330 | Not Available | Positive | 1153591 - 1153992 | 14009.0 |
| peroxiredoxin | RT97_05335 | Not Available | Positive | 1154049 - 1154543 | 16891.4 |
| cupin | RT97_05345 | Not Available | Positive | 1155972 - 1156391 | 14715.1 |
| glutathione s-transferase | RT97_05350 | Not Available | Positive | 1156597 - 1157496 | 33199.6 |
| zinc finger ubp-type protein | RT97_05360 | Not Available | Positive | 1159228 - 1159485 | 9445.3 |
| quinone oxidoreductase | RT97_05365 | Not Available | Negative | 1159500 - 1160483 | 34559.7 |
| nmra family transcriptional regulator | RT97_05370 | Not Available | Negative | 1160533 - 1161288 | 26519.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
