Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_05240 | Not Available | Negative | 1135444 - 1135761 | 12072.5 |
| dna-binding protein | RT97_05245 | Not Available | Positive | 1135988 - 1136254 | 9935.55 |
| twitching motility protein pilt | RT97_05250 | Not Available | Positive | 1136251 - 1136667 | 15113.3 |
| hypothetical protein | RT97_05260 | Not Available | Negative | 1137378 - 1137719 | 12945.5 |
| hypothetical protein | RT97_05270 | Not Available | Positive | 1139002 - 1139433 | 16080.5 |
| hypothetical protein | RT97_05275 | Not Available | Positive | 1140809 - 1142503 | 62692.6 |
| hypothetical protein | RT97_05280 | Not Available | Positive | 1142682 - 1144487 | 67769.7 |
| hypothetical protein | RT97_05290 | Not Available | Positive | 1145428 - 1146117 | 26251.5 |
| chloroperoxidase | RT97_05300 | Not Available | Positive | 1148584 - 1149411 | 30100.4 |
| rna polymerase subunit sigma-24 | RT97_05305 | Not Available | Negative | 1149469 - 1150401 | 35013.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
