Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_05190 | Not Available | Negative | 1124838 - 1125830 | 35964.3 |
| laci family transcriptional regulator | RT97_05195 | Not Available | Negative | 1125879 - 1126853 | 33865.1 |
| 4-hydroxybutyrate dehydrogenase | RT97_05200 | Not Available | Negative | 1126916 - 1128055 | 39099.7 |
| enoyl-coa hydratase | RT97_05205 | Not Available | Positive | 1128331 - 1129110 | 27852.4 |
| coa-transferase | RT97_05210 | Not Available | Positive | 1129152 - 1130393 | 43750.8 |
| abc transporter substrate-binding protein | RT97_05215 | Not Available | Positive | 1130444 - 1131457 | 35172.7 |
| thioesterase | RT97_05220 | Not Available | Positive | 1131475 - 1132401 | 33926.0 |
| lysr family transcriptional regulator | RT97_05225 | Not Available | Negative | 1132425 - 1133348 | 34331.5 |
| lysr family transcriptional regulator | RT97_05230 | Not Available | Positive | 1133553 - 1133975 | 15256.2 |
| dna-binding protein | RT97_05235 | Not Available | Positive | 1134134 - 1134664 | 18645.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
