Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_00450 | Not Available | Negative | 93221 - 94663 | 51272.5 |
| atp-binding protein | RT97_00455 | Not Available | Negative | 94750 - 95142 | 13476.1 |
| transmembrane anti-sigma factor | RT97_00460 | Not Available | Negative | 95215 - 96045 | 30251.9 |
| rna polymerase subunit sigma-24 | RT97_00465 | Not Available | Negative | 96062 - 96577 | 19093.2 |
| hypothetical protein | RT97_00470 | Not Available | Negative | 96603 - 96992 | 13459.9 |
| ssra-binding protein | RT97_00475 | Not Available | Negative | 97087 - 97563 | 18112.9 |
| cyclase | RT97_00480 | Not Available | Positive | 97626 - 98072 | 16385.5 |
| protein rnfh | RT97_00485 | Not Available | Positive | 98072 - 98407 | 12400.9 |
| membrane protein | RT97_00490 | Not Available | Negative | 98423 - 98953 | 18836.4 |
| inosine-5-monophosphate dehydrogenase | RT97_00495 | Not Available | Positive | 99082 - 100551 | 51638.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
