Muribacter muris strain Ackerman80-443D

microaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Muribacter

Description

Muribacter muris strain Ackerman80-443D is a microaerophilic bacterium, indicating that it thrives in environments with low oxygen levels. This trait is significant as it suggests the organism may inhabit specific ecological niches where oxygen concentration is limited, such as the gastrointestinal tracts of mammals. The strain possesses a single replicon, which means it has a simplified genetic structure compared to organisms with multiple replicons. This can impact its genomic stability and evolutionary adaptability. The genetic information for Muribacter muris strain Ackerman80-443D is cataloged under accession JWIZ00000000.1, providing a reference point for genomic studies and further research into its characteristics. Understanding the oxygen requirement and genetic configuration of Muribacter muris strain Ackerman80-443D can provide insights into its ecological role. As a microaerophile, it may contribute to the microbial diversity and metabolic processes within its habitat, potentially influencing host health and digestion. The study of this strain can also shed light on the interactions between gut microbiota and their host organisms, highlighting the importance of specific bacterial traits in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusMuribacter
SpeciesMuribacter muris
Strainstrain Ackerman80-443D

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Muribacter muris strain Ackerman80-443D cont127, whole genome

Gene Summary

Adenine Count

679958 bp

Thymine Count

678407 bp

Guanine Count

549728 bp

Cytosine Count

549270 bp

Genome Length

2457363 bp

Protein-coding Genes

2146 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
na(+)-translocating nadh-quinone reductase subunit fRO21_01455Q9CLA6Positive307966 - 30919845576.6
thiamine biosynthesis protein apbeRO21_01460P44550Positive309332 - 31037538405.1
hypothetical proteinRO21_01465P43960Positive310462 - 3107078801.82
tautomeraseRO21_01470P45418Positive310788 - 3110067857.6
hypothetical proteinRO21_01475Not AvailablePositive311095 - 31144813637.5
trna 2-thiouridylaseRO21_01480Q9CLA3Positive311460 - 31261142581.7
abc transporterRO21_01485Q38VW6Negative312637 - 31365037751.9
iron abc transporter permeaseRO21_01490Not AvailableNegative313652 - 31530461790.9
iron abc transporter substrate-binding proteinRO21_01495Q9HTX3Negative315425 - 31644137410.7
gntr family transcriptional regulatorRO21_01500P12380Positive316866 - 31761227800.3

Displaying genes 341 – 350 of 2247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

125 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da

Displaying 1–10 of 125 metabolites

Health Effects

No health effects information available for this bacterium.