Agrobacterium arsenijevicii strain KFB 330

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium arsenijevicii strain KFB 330 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella. These traits suggest that the organism may be motile, potentially enhancing its ability to colonize various environments. The strain possesses a single replicon, indicating a streamlined genomic structure, which could be relevant for its adaptability and efficiency in certain ecological niches. The genomic data for Agrobacterium arsenijevicii strain KFB 330 is cataloged under the accession number JWIT00000000.1. This accession provides a reference point for researchers seeking to study the genetic makeup and functional capabilities of this strain. The understanding of such traits can be pivotal in various applications, including biotechnology and environmental microbiology. Biologically, the presence of flagella in Agrobacterium arsenijevicii may play a critical role in its ecological interactions, allowing the bacterium to navigate towards nutrients or other microorganisms. The Gram-negative nature of the bacterium also suggests that it possesses an outer membrane, which can influence its interactions with the environment and other organisms. This characteristic is particularly significant in soil and plant-associated ecosystems, where Agrobacterium species are often involved in processes like nutrient cycling and plant-pathogen interactions. Thus, Agrobacterium arsenijevicii strain KFB 330 may contribute to ecological dynamics through its motility and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium arsenijevicii
Strainstrain KFB 330

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium arsenijevicii strain KFB 330
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium arsenijevicii strain KFB 330


Gene Summary

Adenine Count

1304693 bp

Thymine Count

1296725 bp

Guanine Count

1843831 bp

Cytosine Count

1853225 bp

Genome Length

6298483 bp

Protein-coding Genes

5570 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Gene transfer aget (gta) orfg9-like phage major tail proteinRP75_13270Not AvailableNegative2768010 - 276844115392.9
Tail proteinRP75_13275Not AvailableNegative2768499 - 276890314676.5
phage protein, hk97 gp10 familyRP75_13280Not AvailableNegative2768910 - 276939817965.9
Head-tail-adapterRP75_13285Not AvailableNegative2769401 - 276974813210.7
hypothetical proteinRP75_13290Not AvailableNegative2769723 - 27699116850.28
Dna packaging/head-tail-connectorRP75_13295Not AvailableNegative2769922 - 277050321025.9
hypothetical proteinRP75_13300Not AvailableNegative2770505 - 277102619179.4
Major capsid-like proteinRP75_13305P49861Negative2771099 - 277233144008.4
Putative prohead proteaseRP75_13310P49860Negative2772438 - 277310324113.4
Portal-like proteinRP75_13315P49859Negative2773112 - 277432345038.7

Displaying genes 1 – 10 of 5644 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

317 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 317 metabolites

Health Effects

No health effects information available for this bacterium.