Weissella cibaria strain AB3b

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria strain AB3b is a Gram-negative bacterium characterized as a facultative anaerobe. This strain has been isolated from diverse habitats, including Chili Bo, Korean kimchi, pasture, saliva, soil, and tropical fruits. The ability to thrive in various environments suggests a versatile ecological role, particularly in fermentation processes and microbial interactions within these habitats. This strain is associated with multiple hosts, including Homo sapiens and various plant and animal species, such as Brassica oleracea var. capitata (cabbage), Vicia faba (broad bean), Camelus dromedarius (dromedary camel), Oryctolagus cuniculus (European rabbit), and Canis lupus familiaris (domestic dog). The presence of Weissella cibaria in both human and animal hosts indicates its potential significance in gut microbiota and digestive health. Despite its association with humans, the pathogenicity of Weissella cibaria strain AB3b is noted, which underscores the importance of understanding its behavior and interactions in various ecosystems. The strain is represented in the genomic database with the accession JWHT00000000.1, providing a reference for future studies. In summary, the ecological niche of Weissella cibaria strain AB3b exemplifies its adaptability and potential roles in fermentation and host interactions. Its presence across multiple habitats and hosts highlights the complexity of microbial communities and the need to explore their contributions to health and disease.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
Strainstrain AB3b

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Homo sapiens, Brassica oleracea var. capitata, Vicia faba
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella cibaria strain AB3b contig000088, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2311 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail proteinab3b_01352Not AvailableNegative1359922 - 1364019147182.0
Hypothetical proteinab3b_01353Not AvailableNegative1364038 - 13642267348.58
Putative tail componentab3b_01354Not AvailableNegative1364244 - 136467216423.6
Major tail proteinab3b_01355Not AvailableNegative1364768 - 136537021329.1
Putative tail componentab3b_01356Not AvailableNegative1365408 - 136579414857.4
Head-tail connector proteinab3b_01357Not AvailableNegative1365791 - 136627017669.6
Putative head-tail joining proteinab3b_01358Not AvailableNegative1366273 - 136659912162.5
Phage protein dna packaging proteinab3b_01359Not AvailableNegative1366586 - 136690311838.7
Hk97 family phage major capsid proteinab3b_01360Not AvailableNegative1366920 - 136814344420.6
Proteaseab3b_01361Not AvailableNegative1368163 - 136886424880.3

Displaying genes 11 – 20 of 2423 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.