Vibrio renipiscarius strain DCR 1-4-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio renipiscarius strain DCR 1-4-2 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number JTKH00000000.1, allowing for its identification and reference in genomic databases. As a member of the Vibrio genus, V. renipiscarius is likely adapted to aquatic environments, which is a common ecological niche for many Vibrio species. The presence of only one replicon suggests a streamlined genome, potentially reflecting an adaptation to its specific habitat or ecological role. This genomic characteristic may also influence its metabolic capabilities and interactions with other microorganisms within its ecosystem. Understanding the genomic traits of Vibrio renipiscarius strain DCR 1-4-2 can provide insights into its ecological interactions, such as its role in nutrient cycling or its relationships with host organisms in aquatic environments. Further research on this strain could illuminate its potential applications in biotechnology or environmental microbiology, particularly in understanding microbial dynamics in freshwater or marine systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio renipiscarius
Strainstrain DCR 1-4-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio renipiscarius strain DCR 1-4-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio renipiscarius strain DCR 1-4-2 Contig30, whole genome

Gene Summary

Adenine Count

1190862 bp

Thymine Count

1186778 bp

Guanine Count

970154 bp

Cytosine Count

991893 bp

Genome Length

4339718 bp

Protein-coding Genes

3684 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protease 4OJ16_05045Not AvailableNegative1082103 - 108395367373.2
2,4-dienoyl-coa reductaseOJ16_05050Not AvailablePositive1084364 - 108636773588.5
hypothetical proteinOJ16_05055Not AvailableNegative1086433 - 108701421629.9
formyltetrahydrofolate deformylaseOJ16_05060Not AvailableNegative1087217 - 108805031173.5
atp-dependent helicaseOJ16_05065Not AvailablePositive1088318 - 109025871837.6
hypothetical proteinOJ16_05070Not AvailablePositive1090259 - 109096025152.0
chromosome partitioning protein paraOJ16_05075Not AvailablePositive1091003 - 109130511154.5
starvation-inducible proteinOJ16_05080Not AvailablePositive1091361 - 109191820590.7
hydrolaseOJ16_05085Not AvailablePositive1091919 - 109276431455.7
long-chain fatty acid--coa ligaseOJ16_05090Not AvailablePositive1092894 - 109461263519.1

Displaying genes 991 – 1000 of 3800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.