Paenibacillus sp. A3

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. A3 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The genomic data of this strain is cataloged under the accession JTHN00000000.1, which provides a point of reference for researchers interested in its genetic composition and potential applications. Paenibacillus species are known for their versatility and can be found in diverse habitats, often playing significant roles in the soil ecosystem. They are recognized for their capabilities in decomposing organic matter, which can enhance nutrient cycling and improve soil health. This trait highlights their ecological importance, as they contribute to the maintenance of soil fertility and support plant growth. Additionally, species within the Paenibacillus genus are known to exhibit various beneficial traits, such as the ability to produce antimicrobial compounds, which can be advantageous in agricultural practices by suppressing plant pathogens. The specific traits of Paenibacillus sp. A3, while not detailed here, likely align with these general characteristics of the genus, suggesting its potential for biotechnological applications. In summary, Paenibacillus sp. A3, with its single replicon and documented genomic information, represents a fascinating subject for further study. Its ecological role in soil health and potential agricultural benefits underscore its significance within microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. A3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. A3 contig_441, whole genome shotgun sequence.

Gene Summary

Adenine Count

1749698 bp

Thymine Count

1762656 bp

Guanine Count

2017206 bp

Cytosine Count

2034017 bp

Genome Length

7563577 bp

Protein-coding Genes

6363 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinQJ48_00020O68007Positive26697 - 37206392986.0
5s ribosomal rnaNot AvailableNot AvailablePositive29986 - 30102Not Available
phob family transcriptional regulatorQJ48_00025Not AvailablePositive37428 - 3810525498.8
histidine kinaseQJ48_00030Q6GGK7Positive38102 - 3992569606.0
peptidoglycan n-acetylglucosamine deacetylaseQJ48_00035Q81EJ6Positive40044 - 4083530046.1
lysophospholipaseQJ48_00040Not AvailablePositive40861 - 4154124538.4
alginate regulatory proteinQJ48_00045Q88ND2Positive41569 - 4297553246.5
hypothetical proteinQJ48_00050Not AvailablePositive42993 - 4414143509.1
hypothetical proteinQJ48_00055Not AvailablePositive44165 - 4467419101.0
hypothetical proteinQJ48_00065Not AvailableNegative46262 - 4676517310.8

Displaying genes 21 – 30 of 6463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

266 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 266 metabolites

Health Effects

No health effects information available for this bacterium.