Neotamlana sedimentorum strain JCM 19808

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Neotamlana

Description

Neotamlana sedimentorum strain JCM 19808 is characterized by having a single replicon, indicating a streamlined genomic structure conducive to its ecological niche. The strain is documented under the accession number JTDW00000000.1, which is essential for referencing its genetic and taxonomic information in microbial databases. As a member of the genus Neotamlana, this strain is likely adapted to its specific environment, which is typically associated with sedimentary habitats. The ecological role of such microorganisms often involves nutrient cycling and the degradation of organic materials, contributing to the overall health and functioning of their ecosystems. The presence of a single replicon may also suggest a certain degree of evolutionary specialization, potentially allowing for efficient replication and resource utilization in its native habitat. This adaptation could be significant for survival in competitive environments, where resources may be limited or fluctuating. Understanding the specific traits of Neotamlana sedimentorum strain JCM 19808 provides insights into its ecological role and evolutionary strategies. The strain's genomic simplicity, as indicated by the single replicon, may enhance its adaptability and efficiency in sediment environments, highlighting its importance in microbial ecology and potential applications in bioremediation or environmental monitoring.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNeotamlana
SpeciesNeotamlana sedimentorum
Strainstrain JCM 19808

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neotamlana sedimentorum strain JCM 19808 contig54, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorPW52_04830Not AvailablePositive1178792 - 117955629349.3
family 2 glycosyl transferasePW52_04840Not AvailablePositive1180780 - 118175436530.0
hypothetical proteinPW52_04845Not AvailablePositive1181714 - 118259533367.3
hypothetical proteinPW52_04850Not AvailableNegative1182592 - 118416059727.6
hypothetical proteinPW52_04855Not AvailableNegative1184199 - 118490027090.1
atp synthase subunit deltaPW52_04865Not AvailableNegative1187233 - 118752610596.7
atp synthase subunit betaPW52_04870Not AvailableNegative1187625 - 118913353879.6
g-d-s-l family lipolytic proteinPW52_04875Not AvailableNegative1189301 - 119096858860.0
membrane proteinPW52_04880Not AvailableNegative1190974 - 1193727101500.0
glutamine amidotransferasePW52_04885Not AvailableNegative1193919 - 119577268297.4

Displaying genes 921 – 930 of 3186 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.