Neotamlana sedimentorum strain JCM 19808

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Neotamlana

Description

Neotamlana sedimentorum strain JCM 19808 is characterized by having a single replicon, indicating a streamlined genomic structure conducive to its ecological niche. The strain is documented under the accession number JTDW00000000.1, which is essential for referencing its genetic and taxonomic information in microbial databases. As a member of the genus Neotamlana, this strain is likely adapted to its specific environment, which is typically associated with sedimentary habitats. The ecological role of such microorganisms often involves nutrient cycling and the degradation of organic materials, contributing to the overall health and functioning of their ecosystems. The presence of a single replicon may also suggest a certain degree of evolutionary specialization, potentially allowing for efficient replication and resource utilization in its native habitat. This adaptation could be significant for survival in competitive environments, where resources may be limited or fluctuating. Understanding the specific traits of Neotamlana sedimentorum strain JCM 19808 provides insights into its ecological role and evolutionary strategies. The strain's genomic simplicity, as indicated by the single replicon, may enhance its adaptability and efficiency in sediment environments, highlighting its importance in microbial ecology and potential applications in bioremediation or environmental monitoring.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNeotamlana
SpeciesNeotamlana sedimentorum
Strainstrain JCM 19808

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neotamlana sedimentorum strain JCM 19808 contig54, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
toxin hipaPW52_04520Not AvailablePositive1102350 - 110360047383.8
hypothetical proteinPW52_04525Not AvailablePositive1103648 - 110524662597.4
hypothetical proteinPW52_04530Not AvailablePositive1105227 - 110688565550.3
hypothetical proteinPW52_04535Not AvailableNegative1106899 - 110726113447.0
conjugal transfer protein tranPW52_04540Not AvailableNegative1107269 - 110809032114.7
conjugal transfer protein tramPW52_04545Not AvailableNegative1108105 - 110903435223.0
conjugal transfer protein trakPW52_04550Not AvailableNegative1109015 - 110963823742.5
hypothetical proteinPW52_04555Not AvailableNegative1109650 - 111049231583.2
conjugal transfer proteinPW52_04560Not AvailableNegative1110495 - 111107021917.5
conjugal transfer protein tragPW52_04565Not AvailableNegative1111133 - 111353592703.1

Displaying genes 861 – 870 of 3186 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.