Neotamlana sedimentorum strain JCM 19808

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Neotamlana

Description

Neotamlana sedimentorum strain JCM 19808 is characterized by having a single replicon, indicating a streamlined genomic structure conducive to its ecological niche. The strain is documented under the accession number JTDW00000000.1, which is essential for referencing its genetic and taxonomic information in microbial databases. As a member of the genus Neotamlana, this strain is likely adapted to its specific environment, which is typically associated with sedimentary habitats. The ecological role of such microorganisms often involves nutrient cycling and the degradation of organic materials, contributing to the overall health and functioning of their ecosystems. The presence of a single replicon may also suggest a certain degree of evolutionary specialization, potentially allowing for efficient replication and resource utilization in its native habitat. This adaptation could be significant for survival in competitive environments, where resources may be limited or fluctuating. Understanding the specific traits of Neotamlana sedimentorum strain JCM 19808 provides insights into its ecological role and evolutionary strategies. The strain's genomic simplicity, as indicated by the single replicon, may enhance its adaptability and efficiency in sediment environments, highlighting its importance in microbial ecology and potential applications in bioremediation or environmental monitoring.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNeotamlana
SpeciesNeotamlana sedimentorum
Strainstrain JCM 19808

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neotamlana sedimentorum strain JCM 19808 contig54, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laci family transcriptional regulatorPW52_00235Not AvailablePositive58361 - 5936537157.2
transcriptional regulatorPW52_00245Not AvailablePositive61801 - 6247225086.4
membrane proteinPW52_00250Not AvailableNegative62714 - 6321117494.3
copy family transcriptional repressorPW52_00255Not AvailablePositive63353 - 6371213777.7
tpr-domain containing proteinPW52_00265Not AvailablePositive65711 - 6685344277.7
hypothetical proteinPW52_00270Not AvailablePositive66894 - 6737018012.8
beta-lactamase regulatory proteinPW52_00275Not AvailableNegative67416 - 6852541624.8
membrane proteinPW52_00280Not AvailableNegative68522 - 6949337331.0
crossover junction endodeoxyribonuclease ruvcPW52_00285Not AvailablePositive69569 - 7012020266.0
coproporphyrinogen iii oxidasePW52_00290Not AvailablePositive70120 - 7124743080.3

Displaying genes 51 – 60 of 3186 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.