Microbacterium mangrovi strain MUSC 115

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium mangrovi strain MUSC 115 is characterized as a rod-shaped bacterium, indicating a cylindrical morphology typical of many species within the genus Microbacterium. This strain possesses a single replicon, which is indicative of its genomic organization and may reflect its evolutionary adaptations and metabolic capabilities. The strain is documented under the accession number JTDK00000000.1, providing a reference point for researchers interested in its genetic and biochemical properties. This accession indicates that the genomic data for Microbacterium mangrovi strain MUSC 115 is available for further analysis, enabling studies on its phylogenetic relationships and functional genomics. From an ecological perspective, members of the Microbacterium genus are often found in diverse environments, including soil and aquatic ecosystems. The discovery of Microbacterium mangrovi in a mangrove habitat suggests that it may play a role in nutrient cycling and the degradation of organic matter in these unique ecosystems. Mangroves are known for their complex intertidal zones, which can harbor a variety of microbial life that contributes to the overall health and stability of coastal environments. Understanding the traits of Microbacterium mangrovi strain MUSC 115 may provide insights into its potential ecological functions, particularly in relation to the resilience and productivity of mangrove ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium mangrovi
Strainstrain MUSC 115

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium mangrovi strain MUSC 115 Contig55, whole genome

Gene Summary

Adenine Count

660855 bp

Thymine Count

662099 bp

Guanine Count

1546158 bp

Cytosine Count

1547489 bp

Genome Length

4416601 bp

Protein-coding Genes

3509 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospho-n-acetylmuramoyl-pentapeptide- transferaseLK09_13900Not AvailableNegative3047688 - 304879139765.3
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseLK09_13905Not AvailableNegative3048788 - 305020049032.4
cell division protein ftsiLK09_13910Not AvailableNegative3050237 - 305201863442.7
hypothetical proteinLK09_13915Not AvailableNegative3052023 - 305260119955.9
16s rrna methyltransferaseLK09_13920Not AvailableNegative3052598 - 305358135661.8
cell division protein mrazLK09_13925Not AvailableNegative3053683 - 305411416061.0
hypothetical proteinLK09_13930Not AvailableNegative3054302 - 305467613379.3
geranylgeranyl pyrophosphate synthaseLK09_13935Not AvailablePositive3054746 - 305584038162.9
transcriptional regulatorLK09_13940Not AvailableNegative3055852 - 305615711086.3
hypothetical proteinLK09_13945Not AvailablePositive3056408 - 305755939847.8

Displaying genes 2421 – 2430 of 3558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.