Microbacterium mangrovi strain MUSC 115

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium mangrovi strain MUSC 115 is characterized as a rod-shaped bacterium, indicating a cylindrical morphology typical of many species within the genus Microbacterium. This strain possesses a single replicon, which is indicative of its genomic organization and may reflect its evolutionary adaptations and metabolic capabilities. The strain is documented under the accession number JTDK00000000.1, providing a reference point for researchers interested in its genetic and biochemical properties. This accession indicates that the genomic data for Microbacterium mangrovi strain MUSC 115 is available for further analysis, enabling studies on its phylogenetic relationships and functional genomics. From an ecological perspective, members of the Microbacterium genus are often found in diverse environments, including soil and aquatic ecosystems. The discovery of Microbacterium mangrovi in a mangrove habitat suggests that it may play a role in nutrient cycling and the degradation of organic matter in these unique ecosystems. Mangroves are known for their complex intertidal zones, which can harbor a variety of microbial life that contributes to the overall health and stability of coastal environments. Understanding the traits of Microbacterium mangrovi strain MUSC 115 may provide insights into its potential ecological functions, particularly in relation to the resilience and productivity of mangrove ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium mangrovi
Strainstrain MUSC 115

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium mangrovi strain MUSC 115 Contig55, whole genome

Gene Summary

Adenine Count

660855 bp

Thymine Count

662099 bp

Guanine Count

1546158 bp

Cytosine Count

1547489 bp

Genome Length

4416601 bp

Protein-coding Genes

3509 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose-phosphate pyrophosphokinaseLK09_05835Not AvailableNegative1325843 - 132688337612.2
bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferaseLK09_05840Not AvailableNegative1326867 - 132833049707.9
Trna-glnNot AvailableNot AvailablePositive1328332 - 1328403Not Available
marr family transcriptional regulatorLK09_05850Not AvailablePositive1328471 - 132896818820.7
hypothetical proteinLK09_05860Not AvailableNegative1331128 - 133176923511.1
putrescine oxidaseLK09_05865Not AvailableNegative1332221 - 133358849242.6
abc transporter atpaseLK09_05875Not AvailablePositive1334499 - 133632866466.1
glycine/betaine abc transporterLK09_05880Not AvailableNegative1336404 - 133732131865.0
glycine/betaine abc transporter permeaseLK09_05885Not AvailableNegative1337318 - 133803424824.1
abc transporter permeaseLK09_05890Not AvailableNegative1338031 - 133871724531.0

Displaying genes 1011 – 1020 of 3558 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.